Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.81□□□□□ -0.52
ClpbQ60649 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ClpbQ60649 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
ClpbQ60649 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
ClpbQ60649 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.81□□□□□ -0.52
ClpbQ60649 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ClpbQ60649 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.81□□□□□ -0.52
ClpbQ60649 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.81□□□□□ -0.52
ClpbQ60649 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
ClpbQ60649 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.81□□□□□ -0.52
ClpbQ60649 Gm2546-201ENSMUST00000182630 991 ntBASIC11.81□□□□□ -0.52
ClpbQ60649 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.81□□□□□ -0.52
ClpbQ60649 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.81□□□□□ -0.52
ClpbQ60649 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.81□□□□□ -0.52
ClpbQ60649 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ClpbQ60649 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.81□□□□□ -0.52
ClpbQ60649 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.81□□□□□ -0.52
ClpbQ60649 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.81□□□□□ -0.52
ClpbQ60649 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.81□□□□□ -0.52
ClpbQ60649 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ClpbQ60649 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
ClpbQ60649 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.81□□□□□ -0.52
ClpbQ60649 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClpbQ60649 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ClpbQ60649 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ClpbQ60649 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ClpbQ60649 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Gm20482-202ENSMUST00000174729 825 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.8□□□□□ -0.52
ClpbQ60649 Gm27243-201ENSMUST00000183964 521 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.8□□□□□ -0.52
ClpbQ60649 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.8□□□□□ -0.52
ClpbQ60649 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.8□□□□□ -0.52
ClpbQ60649 Gm30285-201ENSMUST00000214614 422 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.8□□□□□ -0.52
ClpbQ60649 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
ClpbQ60649 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.8□□□□□ -0.52
ClpbQ60649 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ClpbQ60649 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ClpbQ60649 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.8□□□□□ -0.52
ClpbQ60649 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ClpbQ60649 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ClpbQ60649 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.79□□□□□ -0.52
ClpbQ60649 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ClpbQ60649 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ClpbQ60649 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ClpbQ60649 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.79□□□□□ -0.52
ClpbQ60649 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms