Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prdm1Q60636 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm14644-201ENSMUST00000116671 647 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm25668-201ENSMUST00000157700 129 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm25890-201ENSMUST00000177643 165 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm22614-201ENSMUST00000178300 165 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm4034-201ENSMUST00000187674 480 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm22042-201ENSMUST00000082989 165 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Gm26110-201ENSMUST00000083971 165 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prdm1Q60636 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prdm1Q60636 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prdm1Q60636 Matn2-203ENSMUST00000226766 3252 ntBASIC14.32□□□□□ -0.12
Prdm1Q60636 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.31□□□□□ -0.12
Prdm1Q60636 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prdm1Q60636 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.31□□□□□ -0.12
Prdm1Q60636 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.31□□□□□ -0.12
Prdm1Q60636 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.31□□□□□ -0.12
Prdm1Q60636 Gm15276-201ENSMUST00000145953 498 ntBASIC14.31□□□□□ -0.12
Prdm1Q60636 Rprl1-201ENSMUST00000158050 327 ntBASIC14.31□□□□□ -0.12
Prdm1Q60636 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Prdm1Q60636 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.31□□□□□ -0.12
Prdm1Q60636 Gm13097-201ENSMUST00000210722 397 ntBASIC14.31□□□□□ -0.12
Prdm1Q60636 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.31□□□□□ -0.12
Prdm1Q60636 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.31□□□□□ -0.12
Prdm1Q60636 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.31□□□□□ -0.12
Prdm1Q60636 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Prdm1Q60636 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prdm1Q60636 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.3□□□□□ -0.12
Prdm1Q60636 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm1Q60636 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Prdm1Q60636 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms