Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc85aQ5SP85 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Gm25880-201ENSMUST00000104331 132 ntBASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Gm14724-201ENSMUST00000118400 537 ntBASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Gm19087-201ENSMUST00000191430 946 ntBASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Gm3793-201ENSMUST00000204973 672 ntBASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85aQ5SP85 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Gm13182-201ENSMUST00000122241 312 ntBASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Gm23771-201ENSMUST00000178702 110 ntBASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Mir6998-201ENSMUST00000183343 64 ntBASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85aQ5SP85 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms