Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim41Q5NCC3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Rprl1-201ENSMUST00000158050 327 ntBASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Mir7076-201ENSMUST00000183519 74 ntBASIC21.34■■□□□ 1.01
Trim41Q5NCC3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Gm42518-201ENSMUST00000196277 938 ntBASIC21.34■■□□□ 1.01
Trim41Q5NCC3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 AC124408.1-201ENSMUST00000228938 707 ntBASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim41Q5NCC3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Gm5847-201ENSMUST00000178959 1595 ntBASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Gm12218-201ENSMUST00000117666 399 ntBASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 H2-Q3-201ENSMUST00000172583 608 ntBASIC21.33■■□□□ 1.01
Trim41Q5NCC3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC21.33■■□□□ 1.01
Trim41Q5NCC3 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC21.33■■□□□ 1.01
Trim41Q5NCC3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Gm45481-201ENSMUST00000209717 877 ntBASIC21.33■■□□□ 1.01
Trim41Q5NCC3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Gm2517-201ENSMUST00000215651 348 ntBASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Gm21811-201ENSMUST00000096485 930 ntBASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim41Q5NCC3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim41Q5NCC3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC21.33■■□□□ 1
Trim41Q5NCC3 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC21.33■■□□□ 1
Trim41Q5NCC3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim41Q5NCC3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trim41Q5NCC3 Gm4735-201ENSMUST00000138679 1302 ntBASIC21.32■■□□□ 1
Trim41Q5NCC3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 Gm5855-201ENSMUST00000200240 1305 ntBASIC21.32■■□□□ 1
Trim41Q5NCC3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 Gm11783-201ENSMUST00000119549 885 ntBASIC21.32■■□□□ 1
Trim41Q5NCC3 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC21.32■■□□□ 1
Trim41Q5NCC3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Trim41Q5NCC3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC21.32■■□□□ 1
Trim41Q5NCC3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Trim41Q5NCC3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC21.32■■□□□ 1
Trim41Q5NCC3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trim41Q5NCC3 n-R5s211-201ENSMUST00000093689 119 ntBASIC21.32■■□□□ 1
Trim41Q5NCC3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Trim41Q5NCC3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim41Q5NCC3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms