Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.63□□□□□ -0.07
Rnf20Q5DTM8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.63□□□□□ -0.07
Rnf20Q5DTM8 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Morn2-202ENSMUST00000227729 656 ntBASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf20Q5DTM8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Gm4986-201ENSMUST00000119731 549 ntBASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Gm42693-201ENSMUST00000196779 631 ntBASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Gm6013-201ENSMUST00000212264 699 ntBASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Gm9823-201ENSMUST00000051212 327 ntBASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf20Q5DTM8 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Gm23912-201ENSMUST00000104687 87 ntBASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Gm10608-202ENSMUST00000213924 676 ntBASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rnf20Q5DTM8 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms