Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38aQ4FK66 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gm7848-201ENSMUST00000210739 718 ntBASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gm270-201ENSMUST00000223010 976 ntBASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38aQ4FK66 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Prpf38aQ4FK66 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Prpf38aQ4FK66 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Prpf38aQ4FK66 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf38aQ4FK66 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf38aQ4FK66 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf38aQ4FK66 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Prpf38aQ4FK66 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Gm4607-201ENSMUST00000206649 577 ntBASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf38aQ4FK66 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms