Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.75□□□□□ -0.37
Trim80Q3V061 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.75□□□□□ -0.37
Trim80Q3V061 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.75□□□□□ -0.37
Trim80Q3V061 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.75□□□□□ -0.37
Trim80Q3V061 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.75□□□□□ -0.37
Trim80Q3V061 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.75□□□□□ -0.37
Trim80Q3V061 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.75□□□□□ -0.37
Trim80Q3V061 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.75□□□□□ -0.37
Trim80Q3V061 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim80Q3V061 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.75□□□□□ -0.37
Trim80Q3V061 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim80Q3V061 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim80Q3V061 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trim80Q3V061 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trim80Q3V061 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim80Q3V061 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.74□□□□□ -0.37
Trim80Q3V061 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim80Q3V061 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Gm8213-201ENSMUST00000118191 441 ntBASIC12.74□□□□□ -0.37
Trim80Q3V061 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim80Q3V061 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim80Q3V061 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim80Q3V061 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trim80Q3V061 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.74□□□□□ -0.37
Trim80Q3V061 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trim80Q3V061 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim80Q3V061 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.74□□□□□ -0.37
Trim80Q3V061 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim80Q3V061 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Trim80Q3V061 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim80Q3V061 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trim80Q3V061 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim80Q3V061 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.73□□□□□ -0.37
Trim80Q3V061 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim80Q3V061 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms