Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Gm14704-201ENSMUST00000120300 874 ntBASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Gm6152-201ENSMUST00000151704 340 ntBASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim40Q3UWA4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Gm23363-201ENSMUST00000175024 79 ntBASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Gm18624-201ENSMUST00000220966 658 ntBASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trim40Q3UWA4 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms