Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Arhgef40Q3UPH7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Arhgef40Q3UPH7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Arhgef40Q3UPH7 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC17.76■□□□□ 0.43
Arhgef40Q3UPH7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Arhgef40Q3UPH7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Gm22442-201ENSMUST00000157256 144 ntBASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Gm4862-201ENSMUST00000170405 438 ntBASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Gm44124-201ENSMUST00000204159 472 ntBASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Mt1-202ENSMUST00000211807 1085 ntBASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Gm25201-201ENSMUST00000083093 170 ntBASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Arhgef40Q3UPH7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Gm44758-201ENSMUST00000206096 2068 ntBASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Gm27196-201ENSMUST00000184787 2582 ntBASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Gm13347-201ENSMUST00000120298 1353 ntBASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Arhgef40Q3UPH7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Gm8574-201ENSMUST00000203207 924 ntBASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Gm9661-201ENSMUST00000221611 1122 ntBASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC17.73■□□□□ 0.43
Arhgef40Q3UPH7 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms