Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nlrc4Q3UP24 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nlrc4Q3UP24 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm25700-201ENSMUST00000177693 110 ntBASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm4034-201ENSMUST00000187674 480 ntBASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm19187-201ENSMUST00000206781 892 ntBASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nlrc4Q3UP24 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms