Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Gm13369-201ENSMUST00000119442 987 ntBASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Mir1982-201ENSMUST00000157368 74 ntBASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Gm8810-201ENSMUST00000172895 754 ntBASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Gm8652-201ENSMUST00000181363 964 ntBASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Gm7561-201ENSMUST00000211203 886 ntBASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43aQ3TL54 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43aQ3TL54 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Gm12203-201ENSMUST00000118235 598 ntBASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Gm11803-201ENSMUST00000119966 444 ntBASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Gm12209-201ENSMUST00000120089 596 ntBASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Gm4768-201ENSMUST00000206199 686 ntBASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Gm10146-201ENSMUST00000072739 309 ntBASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim43aQ3TL54 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Gm12363-201ENSMUST00000122250 668 ntBASIC13.01□□□□□ -0.33
Trim43aQ3TL54 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.01□□□□□ -0.33
Trim43aQ3TL54 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.01□□□□□ -0.33
Trim43aQ3TL54 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Gm19163-201ENSMUST00000223313 780 ntBASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms