Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Gm22877-201ENSMUST00000175451 105 ntBASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim7Q3TJD7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim7Q3TJD7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Pdlim7Q3TJD7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Pdlim7Q3TJD7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim7Q3TJD7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim7Q3TJD7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.71□□□□□ -0.22
Pdlim7Q3TJD7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim7Q3TJD7 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim7Q3TJD7 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim7Q3TJD7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gm13916-201ENSMUST00000117368 628 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gm12579-201ENSMUST00000118040 783 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gm8731-201ENSMUST00000118088 412 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gm4654-201ENSMUST00000183305 982 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gm17877-201ENSMUST00000192578 814 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gm8956-201ENSMUST00000203939 825 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gm19009-201ENSMUST00000223072 823 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gm5705-201ENSMUST00000066241 711 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim7Q3TJD7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm16166-201ENSMUST00000118291 787 ntBASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm20392-201ENSMUST00000173047 701 ntBASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm21092-201ENSMUST00000178995 955 ntBASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.69□□□□□ -0.22
Pdlim7Q3TJD7 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms