Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc4Q3TCX3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm14028-201ENSMUST00000117434 479 ntBASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm26361-201ENSMUST00000158868 186 ntBASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm44262-201ENSMUST00000204969 372 ntBASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm19208-201ENSMUST00000213861 912 ntBASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Nsd1-205ENSMUST00000224693 852 ntBASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc4Q3TCX3 Cog3-203ENSMUST00000227473 4197 ntBASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Gm14921-201ENSMUST00000118643 908 ntBASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Gm13665-201ENSMUST00000120830 528 ntBASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 B9d1os-201ENSMUST00000137010 674 ntBASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Mir6979-201ENSMUST00000183927 56 ntBASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Gm37201-201ENSMUST00000191845 523 ntBASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc4Q3TCX3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc4Q3TCX3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Khdc4Q3TCX3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc4Q3TCX3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.71□□□□□ -0.54
Khdc4Q3TCX3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Khdc4Q3TCX3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms