Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.06□□□□□ -0.8
Trim63Q38HM4 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.06□□□□□ -0.8
Trim63Q38HM4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Gm16198-201ENSMUST00000118766 670 ntBASIC10.05□□□□□ -0.8
Trim63Q38HM4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim63Q38HM4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.04□□□□□ -0.8
Trim63Q38HM4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.04□□□□□ -0.8
Trim63Q38HM4 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Gm43589-201ENSMUST00000199400 1523 ntBASIC10.04□□□□□ -0.8
Trim63Q38HM4 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Gm13418-201ENSMUST00000119097 944 ntBASIC10.04□□□□□ -0.8
Trim63Q38HM4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Gm6659-201ENSMUST00000174752 547 ntBASIC10.04□□□□□ -0.8
Trim63Q38HM4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trim63Q38HM4 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.04□□□□□ -0.8
Trim63Q38HM4 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms