Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rab42Q0PD08 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rab42Q0PD08 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rab42Q0PD08 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rab42Q0PD08 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.91□□□□□ -0.66
Rab42Q0PD08 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rab42Q0PD08 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rab42Q0PD08 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.9□□□□□ -0.66
Rab42Q0PD08 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.9□□□□□ -0.66
Rab42Q0PD08 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Gm12091-201ENSMUST00000146791 830 ntBASIC10.9□□□□□ -0.66
Rab42Q0PD08 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Gm28911-201ENSMUST00000188837 117 ntBASIC10.9□□□□□ -0.66
Rab42Q0PD08 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rab42Q0PD08 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rab42Q0PD08 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rab42Q0PD08 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rab42Q0PD08 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rab42Q0PD08 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rab42Q0PD08 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rab42Q0PD08 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rab42Q0PD08 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Rab42Q0PD08 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rab42Q0PD08 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Rab42Q0PD08 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.89□□□□□ -0.67
Rab42Q0PD08 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Gm2495-201ENSMUST00000191160 466 ntBASIC10.89□□□□□ -0.67
Rab42Q0PD08 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rab42Q0PD08 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.88□□□□□ -0.67
Rab42Q0PD08 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms