Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm13315-201ENSMUST00000120376 991 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm13813-201ENSMUST00000120998 787 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.48□□□□□ -0.41
Ebf1Q07802 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm29615-201ENSMUST00000185371 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm28224-201ENSMUST00000186078 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm29001-201ENSMUST00000186177 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm28292-201ENSMUST00000186593 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm28101-201ENSMUST00000187608 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm29076-201ENSMUST00000187689 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm28302-201ENSMUST00000187931 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm28646-201ENSMUST00000188220 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm28205-201ENSMUST00000189177 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm29032-201ENSMUST00000189797 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm28695-201ENSMUST00000190300 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm37448-201ENSMUST00000192795 697 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.48□□□□□ -0.41
Ebf1Q07802 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.48□□□□□ -0.41
Ebf1Q07802 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf1Q07802 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ebf1Q07802 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ebf1Q07802 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.47□□□□□ -0.41
Ebf1Q07802 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.47□□□□□ -0.41
Ebf1Q07802 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.47□□□□□ -0.41
Ebf1Q07802 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
Ebf1Q07802 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.47□□□□□ -0.41
Ebf1Q07802 AY036118-201ENSMUST00000200021 923 ntBASIC12.47□□□□□ -0.41
Ebf1Q07802 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.47□□□□□ -0.41
Ebf1Q07802 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.47□□□□□ -0.41
Ebf1Q07802 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.47□□□□□ -0.41
Ebf1Q07802 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Gm10076-201ENSMUST00000073238 384 ntBASIC12.47□□□□□ -0.41
Ebf1Q07802 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ebf1Q07802 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.47□□□□□ -0.41
Ebf1Q07802 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ebf1Q07802 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ebf1Q07802 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ebf1Q07802 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf1Q07802 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.46□□□□□ -0.41
Ebf1Q07802 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf1Q07802 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms