Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gabpb1Q00420 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.47□□□□□ -0.41
Gabpb1Q00420 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gm13392-201ENSMUST00000117708 150 ntBASIC12.47□□□□□ -0.41
Gabpb1Q00420 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.47□□□□□ -0.41
Gabpb1Q00420 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gm25043-201ENSMUST00000158604 212 ntBASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gm45880-201ENSMUST00000213041 853 ntBASIC12.47□□□□□ -0.41
Gabpb1Q00420 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gm9899-201ENSMUST00000065519 555 ntBASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gm10478-201ENSMUST00000084451 396 ntBASIC12.47□□□□□ -0.41
Gabpb1Q00420 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.47□□□□□ -0.41
Gabpb1Q00420 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gabpb1Q00420 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gabpb1Q00420 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Gm11793-201ENSMUST00000120433 981 ntBASIC12.46□□□□□ -0.41
Gabpb1Q00420 Gm13786-201ENSMUST00000122371 333 ntBASIC12.46□□□□□ -0.41
Gabpb1Q00420 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.46□□□□□ -0.41
Gabpb1Q00420 Gm43630-201ENSMUST00000201550 776 ntBASIC12.46□□□□□ -0.41
Gabpb1Q00420 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.46□□□□□ -0.41
Gabpb1Q00420 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.46□□□□□ -0.41
Gabpb1Q00420 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabpb1Q00420 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabpb1Q00420 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabpb1Q00420 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.46□□□□□ -0.42
Gabpb1Q00420 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabpb1Q00420 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabpb1Q00420 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabpb1Q00420 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Gabpb1Q00420 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Gabpb1Q00420 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Gabpb1Q00420 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Gabpb1Q00420 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.45□□□□□ -0.42
Gabpb1Q00420 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gabpb1Q00420 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms