Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.36□□□□□ -0.59
Cacna1aP97445 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cacna1aP97445 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cacna1aP97445 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Gm24934-201ENSMUST00000103764 111 ntBASIC11.35□□□□□ -0.59
Cacna1aP97445 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Gm16166-201ENSMUST00000118291 787 ntBASIC11.35□□□□□ -0.59
Cacna1aP97445 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.35□□□□□ -0.59
Cacna1aP97445 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.35□□□□□ -0.59
Cacna1aP97445 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cacna1aP97445 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Gm5733-201ENSMUST00000190232 939 ntBASIC11.35□□□□□ -0.59
Cacna1aP97445 Gm45500-201ENSMUST00000211676 803 ntBASIC11.35□□□□□ -0.59
Cacna1aP97445 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.35□□□□□ -0.59
Cacna1aP97445 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.35□□□□□ -0.59
Cacna1aP97445 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.35□□□□□ -0.59
Cacna1aP97445 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cacna1aP97445 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.35□□□□□ -0.59
Cacna1aP97445 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Cacna1aP97445 Gm45527-201ENSMUST00000211052 774 ntBASIC11.35□□□□□ -0.59
Cacna1aP97445 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.35□□□□□ -0.59
Cacna1aP97445 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.35□□□□□ -0.59
Cacna1aP97445 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cacna1aP97445 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Cacna1aP97445 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cacna1aP97445 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Gm5257-201ENSMUST00000121823 790 ntBASIC11.34□□□□□ -0.59
Cacna1aP97445 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.34□□□□□ -0.59
Cacna1aP97445 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Gm28388-201ENSMUST00000186262 437 ntBASIC11.34□□□□□ -0.59
Cacna1aP97445 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.34□□□□□ -0.59
Cacna1aP97445 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cacna1aP97445 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.34□□□□□ -0.59
Cacna1aP97445 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Cacna1aP97445 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.34□□□□□ -0.59
Cacna1aP97445 Gm14274-201ENSMUST00000117182 615 ntBASIC11.34□□□□□ -0.59
Cacna1aP97445 Gm12857-201ENSMUST00000117678 592 ntBASIC11.34□□□□□ -0.59
Cacna1aP97445 Gm23085-201ENSMUST00000157849 293 ntBASIC11.34□□□□□ -0.59
Cacna1aP97445 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.34□□□□□ -0.59
Cacna1aP97445 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.34□□□□□ -0.59
Cacna1aP97445 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cacna1aP97445 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.34□□□□□ -0.59
Cacna1aP97445 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Cacna1aP97445 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cacna1aP97445 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.33□□□□□ -0.59
Cacna1aP97445 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Cacna1aP97445 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cacna1aP97445 Gm12943-201ENSMUST00000119616 210 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 Gm8343-201ENSMUST00000182705 994 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 Mir7677-201ENSMUST00000184226 67 ntBASIC11.33□□□□□ -0.6
Cacna1aP97445 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms