Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.48□□□□□ -0.25
Lig3P97386 Gm11930-201ENSMUST00000117788 190 ntBASIC13.48□□□□□ -0.25
Lig3P97386 Gm6447-201ENSMUST00000118905 835 ntBASIC13.48□□□□□ -0.25
Lig3P97386 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.48□□□□□ -0.25
Lig3P97386 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.48□□□□□ -0.25
Lig3P97386 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.48□□□□□ -0.25
Lig3P97386 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lig3P97386 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.48□□□□□ -0.25
Lig3P97386 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lig3P97386 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lig3P97386 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.47□□□□□ -0.25
Lig3P97386 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.47□□□□□ -0.25
Lig3P97386 Gm11531-201ENSMUST00000117614 555 ntBASIC13.47□□□□□ -0.25
Lig3P97386 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.47□□□□□ -0.25
Lig3P97386 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.47□□□□□ -0.25
Lig3P97386 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Gm26361-201ENSMUST00000158868 186 ntBASIC13.47□□□□□ -0.25
Lig3P97386 Gm9550-201ENSMUST00000161130 862 ntBASIC13.47□□□□□ -0.25
Lig3P97386 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lig3P97386 Gm45118-201ENSMUST00000208928 825 ntBASIC13.47□□□□□ -0.25
Lig3P97386 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.47□□□□□ -0.25
Lig3P97386 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lig3P97386 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lig3P97386 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lig3P97386 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lig3P97386 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Lig3P97386 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lig3P97386 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lig3P97386 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.47□□□□□ -0.25
Lig3P97386 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lig3P97386 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Lig3P97386 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.46□□□□□ -0.25
Lig3P97386 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.46□□□□□ -0.25
Lig3P97386 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.46□□□□□ -0.25
Lig3P97386 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lig3P97386 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.46□□□□□ -0.25
Lig3P97386 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lig3P97386 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.46□□□□□ -0.25
Lig3P97386 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lig3P97386 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.46□□□□□ -0.25
Lig3P97386 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.46□□□□□ -0.25
Lig3P97386 Gm27438-201ENSMUST00000183480 110 ntBASIC13.46□□□□□ -0.25
Lig3P97386 Mir7221-201ENSMUST00000184009 72 ntBASIC13.46□□□□□ -0.25
Lig3P97386 Gm28693-202ENSMUST00000190758 331 ntBASIC13.46□□□□□ -0.25
Lig3P97386 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.46□□□□□ -0.25
Lig3P97386 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.46□□□□□ -0.25
Lig3P97386 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Lig3P97386 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.46□□□□□ -0.25
Lig3P97386 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms