Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.32□□□□□ -0.12
Pkp1P97350 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.32□□□□□ -0.12
Pkp1P97350 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pkp1P97350 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Pkp1P97350 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.32□□□□□ -0.12
Pkp1P97350 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.32□□□□□ -0.12
Pkp1P97350 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.32□□□□□ -0.12
Pkp1P97350 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.32□□□□□ -0.12
Pkp1P97350 Rprl1-201ENSMUST00000158050 327 ntBASIC14.32□□□□□ -0.12
Pkp1P97350 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Pkp1P97350 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.32□□□□□ -0.12
Pkp1P97350 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.32□□□□□ -0.12
Pkp1P97350 Gm19994-201ENSMUST00000217086 586 ntBASIC14.32□□□□□ -0.12
Pkp1P97350 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pkp1P97350 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.32□□□□□ -0.12
Pkp1P97350 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pkp1P97350 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pkp1P97350 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pkp1P97350 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pkp1P97350 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.31□□□□□ -0.12
Pkp1P97350 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.31□□□□□ -0.12
Pkp1P97350 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pkp1P97350 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.31□□□□□ -0.12
Pkp1P97350 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.31□□□□□ -0.12
Pkp1P97350 Gm6013-201ENSMUST00000212264 699 ntBASIC14.31□□□□□ -0.12
Pkp1P97350 Gm5186-201ENSMUST00000218781 920 ntBASIC14.31□□□□□ -0.12
Pkp1P97350 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pkp1P97350 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Pkp1P97350 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pkp1P97350 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pkp1P97350 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.31□□□□□ -0.12
Pkp1P97350 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pkp1P97350 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.3□□□□□ -0.12
Pkp1P97350 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.3□□□□□ -0.12
Pkp1P97350 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.3□□□□□ -0.12
Pkp1P97350 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.3□□□□□ -0.12
Pkp1P97350 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.3□□□□□ -0.12
Pkp1P97350 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.3□□□□□ -0.12
Pkp1P97350 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pkp1P97350 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.3□□□□□ -0.12
Pkp1P97350 Gm30285-201ENSMUST00000214614 422 ntBASIC14.3□□□□□ -0.12
Pkp1P97350 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.3□□□□□ -0.12
Pkp1P97350 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Gm7399-201ENSMUST00000032395 858 ntBASIC14.3□□□□□ -0.12
Pkp1P97350 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Pkp1P97350 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkp1P97350 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms