Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Gm44106-201ENSMUST00000203153 1599 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
PrkdcP97313 Gm20091-201ENSMUST00000179683 189 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Gm9162-201ENSMUST00000182081 991 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 Ighv5-8-202ENSMUST00000191967 337 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 AC166361.2-201ENSMUST00000219269 1415 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC8.07□□□□□ -1.12
PrkdcP97313 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
PrkdcP97313 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC8.07□□□□□ -1.12
PrkdcP97313 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 AC125409.3-201ENSMUST00000223488 653 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 AC151895.1-201ENSMUST00000219025 1742 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
PrkdcP97313 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Gm12912-201ENSMUST00000121596 1381 ntBASIC8.07□□□□□ -1.12
PrkdcP97313 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PrkdcP97313 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
PrkdcP97313 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Zcwpw2-203ENSMUST00000187803 372 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
PrkdcP97313 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
PrkdcP97313 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC8.06□□□□□ -1.12
PrkdcP97313 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
PrkdcP97313 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
PrkdcP97313 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC8.06□□□□□ -1.12
PrkdcP97313 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PrkdcP97313 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm11473-201ENSMUST00000118980 359 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Gm16210-201ENSMUST00000122161 610 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm31274-201ENSMUST00000197356 229 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC8.06□□□□□ -1.12
PrkdcP97313 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 AC107711.4-201ENSMUST00000228948 440 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PrkdcP97313 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
PrkdcP97313 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Map1b-203ENSMUST00000223725 2669 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm12247-201ENSMUST00000117585 670 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm18555-201ENSMUST00000197935 584 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm18001-201ENSMUST00000212023 688 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC8.06□□□□□ -1.12
PrkdcP97313 CT009550.1-201ENSMUST00000225750 864 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 AC103672.1-201ENSMUST00000227502 365 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms