Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trim43bP86448 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.65□□□□□ -0.38
Trim43bP86448 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim43bP86448 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim43bP86448 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43bP86448 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim43bP86448 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43bP86448 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trim43bP86448 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43bP86448 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43bP86448 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trim43bP86448 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.65□□□□□ -0.38
Trim43bP86448 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.65□□□□□ -0.38
Trim43bP86448 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43bP86448 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43bP86448 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim43bP86448 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43bP86448 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43bP86448 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43bP86448 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trim43bP86448 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim43bP86448 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 Gm16479-201ENSMUST00000121706 932 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim43bP86448 Gm7029-201ENSMUST00000173226 450 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim43bP86448 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim43bP86448 Gm38002-201ENSMUST00000193255 180 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 Gm18054-201ENSMUST00000207539 555 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Gm19163-201ENSMUST00000223313 780 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.64□□□□□ -0.39
Trim43bP86448 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43bP86448 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim43bP86448 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43bP86448 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms