Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.31□□□□□ -0.76
SgcaP82350 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SgcaP82350 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.31□□□□□ -0.76
SgcaP82350 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
SgcaP82350 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
SgcaP82350 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SgcaP82350 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.31□□□□□ -0.76
SgcaP82350 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcaP82350 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.3□□□□□ -0.76
SgcaP82350 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.3□□□□□ -0.76
SgcaP82350 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SgcaP82350 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.3□□□□□ -0.76
SgcaP82350 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.3□□□□□ -0.76
SgcaP82350 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SgcaP82350 Gm13689-201ENSMUST00000119360 685 ntBASIC10.3□□□□□ -0.76
SgcaP82350 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.3□□□□□ -0.76
SgcaP82350 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.3□□□□□ -0.76
SgcaP82350 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
SgcaP82350 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.3□□□□□ -0.76
SgcaP82350 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.3□□□□□ -0.76
SgcaP82350 Gm42599-201ENSMUST00000201308 469 ntBASIC10.3□□□□□ -0.76
SgcaP82350 Gm44069-201ENSMUST00000204898 506 ntBASIC10.3□□□□□ -0.76
SgcaP82350 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.3□□□□□ -0.76
SgcaP82350 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
SgcaP82350 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SgcaP82350 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
SgcaP82350 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
SgcaP82350 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SgcaP82350 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.3□□□□□ -0.76
SgcaP82350 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SgcaP82350 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SgcaP82350 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcaP82350 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
SgcaP82350 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SgcaP82350 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
SgcaP82350 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.29□□□□□ -0.76
SgcaP82350 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SgcaP82350 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.29□□□□□ -0.76
SgcaP82350 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SgcaP82350 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SgcaP82350 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SgcaP82350 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.29□□□□□ -0.76
SgcaP82350 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.29□□□□□ -0.76
SgcaP82350 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SgcaP82350 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcaP82350 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms