Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb1P70662 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ldb1P70662 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ldb1P70662 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.22□□□□□ -0.45
Ldb1P70662 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.22□□□□□ -0.45
Ldb1P70662 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ldb1P70662 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Gm11531-201ENSMUST00000117614 555 ntBASIC12.22□□□□□ -0.45
Ldb1P70662 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.22□□□□□ -0.45
Ldb1P70662 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ldb1P70662 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.22□□□□□ -0.45
Ldb1P70662 Gm29396-201ENSMUST00000185659 716 ntBASIC12.22□□□□□ -0.45
Ldb1P70662 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.22□□□□□ -0.45
Ldb1P70662 Gm44958-201ENSMUST00000203734 736 ntBASIC12.22□□□□□ -0.45
Ldb1P70662 Olfr284-202ENSMUST00000206647 966 ntBASIC12.22□□□□□ -0.45
Ldb1P70662 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.22□□□□□ -0.45
Ldb1P70662 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.22□□□□□ -0.45
Ldb1P70662 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ldb1P70662 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ldb1P70662 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.22□□□□□ -0.45
Ldb1P70662 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ldb1P70662 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.22□□□□□ -0.45
Ldb1P70662 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb1P70662 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.21□□□□□ -0.45
Ldb1P70662 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ldb1P70662 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.21□□□□□ -0.45
Ldb1P70662 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.21□□□□□ -0.45
Ldb1P70662 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.21□□□□□ -0.45
Ldb1P70662 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.21□□□□□ -0.45
Ldb1P70662 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.21□□□□□ -0.45
Ldb1P70662 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ldb1P70662 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ldb1P70662 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.21□□□□□ -0.45
Ldb1P70662 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ldb1P70662 Gm25214-201ENSMUST00000104573 129 ntBASIC12.21□□□□□ -0.45
Ldb1P70662 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.21□□□□□ -0.45
Ldb1P70662 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.21□□□□□ -0.45
Ldb1P70662 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.21□□□□□ -0.45
Ldb1P70662 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.21□□□□□ -0.45
Ldb1P70662 Gm37489-201ENSMUST00000191883 159 ntBASIC12.21□□□□□ -0.45
Ldb1P70662 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Gm5950-201ENSMUST00000213337 772 ntBASIC12.21□□□□□ -0.45
Ldb1P70662 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.21□□□□□ -0.45
Ldb1P70662 Morn2-202ENSMUST00000227729 656 ntBASIC12.21□□□□□ -0.45
Ldb1P70662 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ldb1P70662 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ldb1P70662 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ldb1P70662 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb1P70662 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.21□□□□□ -0.46
Ldb1P70662 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb1P70662 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb1P70662 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.21□□□□□ -0.46
Ldb1P70662 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb1P70662 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb1P70662 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb1P70662 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb1P70662 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ldb1P70662 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb1P70662 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ldb1P70662 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb1P70662 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb1P70662 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ldb1P70662 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb1P70662 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ldb1P70662 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms