Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cxcr4P70658 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcr4P70658 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.54□□□□□ -0.56
Cxcr4P70658 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Cxcr4P70658 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcr4P70658 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcr4P70658 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcr4P70658 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcr4P70658 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcr4P70658 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcr4P70658 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcr4P70658 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cxcr4P70658 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Gm24231-201ENSMUST00000104315 133 ntBASIC11.53□□□□□ -0.56
Cxcr4P70658 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.53□□□□□ -0.56
Cxcr4P70658 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.53□□□□□ -0.56
Cxcr4P70658 Gm11793-201ENSMUST00000120433 981 ntBASIC11.53□□□□□ -0.56
Cxcr4P70658 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.53□□□□□ -0.56
Cxcr4P70658 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.53□□□□□ -0.56
Cxcr4P70658 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.53□□□□□ -0.56
Cxcr4P70658 Gm3890-201ENSMUST00000182416 207 ntBASIC11.53□□□□□ -0.56
Cxcr4P70658 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Gm43179-201ENSMUST00000198797 275 ntBASIC11.53□□□□□ -0.56
Cxcr4P70658 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.53□□□□□ -0.56
Cxcr4P70658 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Cxcr4P70658 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cxcr4P70658 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcr4P70658 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cxcr4P70658 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcr4P70658 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Mir1247-201ENSMUST00000116706 82 ntBASIC11.52□□□□□ -0.57
Cxcr4P70658 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.52□□□□□ -0.57
Cxcr4P70658 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.52□□□□□ -0.57
Cxcr4P70658 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.52□□□□□ -0.57
Cxcr4P70658 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.52□□□□□ -0.57
Cxcr4P70658 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.52□□□□□ -0.57
Cxcr4P70658 Gm38266-201ENSMUST00000194931 421 ntBASIC11.52□□□□□ -0.57
Cxcr4P70658 Gm42599-201ENSMUST00000201308 469 ntBASIC11.52□□□□□ -0.57
Cxcr4P70658 Gm18935-201ENSMUST00000212692 664 ntBASIC11.52□□□□□ -0.57
Cxcr4P70658 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.52□□□□□ -0.57
Cxcr4P70658 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cxcr4P70658 Olfr582-201ENSMUST00000098212 960 ntBASIC11.52□□□□□ -0.57
Cxcr4P70658 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.52□□□□□ -0.57
Cxcr4P70658 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.52□□□□□ -0.57
Cxcr4P70658 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcr4P70658 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms