Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Shox2P70390 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Shox2P70390 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.11□□□□□ -0.47
Shox2P70390 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Gm13453-201ENSMUST00000118708 357 ntBASIC12.11□□□□□ -0.47
Shox2P70390 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.11□□□□□ -0.47
Shox2P70390 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.11□□□□□ -0.47
Shox2P70390 Gm9136-201ENSMUST00000193368 454 ntBASIC12.11□□□□□ -0.47
Shox2P70390 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Shox2P70390 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Shox2P70390 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Shox2P70390 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Shox2P70390 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Shox2P70390 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Shox2P70390 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.11□□□□□ -0.47
Shox2P70390 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.11□□□□□ -0.47
Shox2P70390 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Shox2P70390 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shox2P70390 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.1□□□□□ -0.47
Shox2P70390 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Shox2P70390 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.1□□□□□ -0.47
Shox2P70390 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Shox2P70390 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.1□□□□□ -0.47
Shox2P70390 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.1□□□□□ -0.47
Shox2P70390 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.1□□□□□ -0.47
Shox2P70390 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.1□□□□□ -0.47
Shox2P70390 Gm6983-201ENSMUST00000214912 628 ntBASIC12.1□□□□□ -0.47
Shox2P70390 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.1□□□□□ -0.47
Shox2P70390 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.1□□□□□ -0.47
Shox2P70390 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.1□□□□□ -0.47
Shox2P70390 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Shox2P70390 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.1□□□□□ -0.47
Shox2P70390 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shox2P70390 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.09□□□□□ -0.47
Shox2P70390 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Shox2P70390 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.09□□□□□ -0.47
Shox2P70390 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Shox2P70390 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.09□□□□□ -0.47
Shox2P70390 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shox2P70390 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.09□□□□□ -0.47
Shox2P70390 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.09□□□□□ -0.47
Shox2P70390 Gm27525-201ENSMUST00000184465 107 ntBASIC12.09□□□□□ -0.47
Shox2P70390 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms