Protein–RNA interactions for Protein: P70122

Sbds, Ribosome maturation protein SBDS, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SbdsP70122 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SbdsP70122 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.82□□□□□ -0.36
SbdsP70122 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SbdsP70122 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SbdsP70122 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SbdsP70122 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.82□□□□□ -0.36
SbdsP70122 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Gm13315-201ENSMUST00000120376 991 ntBASIC12.82□□□□□ -0.36
SbdsP70122 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.82□□□□□ -0.36
SbdsP70122 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.82□□□□□ -0.36
SbdsP70122 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SbdsP70122 Gm43818-201ENSMUST00000200605 466 ntBASIC12.82□□□□□ -0.36
SbdsP70122 Gm18584-201ENSMUST00000203098 964 ntBASIC12.82□□□□□ -0.36
SbdsP70122 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.82□□□□□ -0.36
SbdsP70122 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Gm22058-201ENSMUST00000083393 310 ntBASIC12.82□□□□□ -0.36
SbdsP70122 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.82□□□□□ -0.36
SbdsP70122 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SbdsP70122 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SbdsP70122 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SbdsP70122 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SbdsP70122 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.81□□□□□ -0.36
SbdsP70122 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.81□□□□□ -0.36
SbdsP70122 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SbdsP70122 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.81□□□□□ -0.36
SbdsP70122 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
SbdsP70122 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.81□□□□□ -0.36
SbdsP70122 Gm1335-201ENSMUST00000121653 386 ntBASIC12.81□□□□□ -0.36
SbdsP70122 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.81□□□□□ -0.36
SbdsP70122 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.81□□□□□ -0.36
SbdsP70122 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.81□□□□□ -0.36
SbdsP70122 Gm27682-201ENSMUST00000183930 110 ntBASIC12.81□□□□□ -0.36
SbdsP70122 Gm18304-201ENSMUST00000189162 546 ntBASIC12.81□□□□□ -0.36
SbdsP70122 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.81□□□□□ -0.36
SbdsP70122 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SbdsP70122 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SbdsP70122 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SbdsP70122 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.81□□□□□ -0.36
SbdsP70122 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SbdsP70122 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SbdsP70122 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SbdsP70122 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SbdsP70122 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.8□□□□□ -0.36
SbdsP70122 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.8□□□□□ -0.36
SbdsP70122 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SbdsP70122 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SbdsP70122 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SbdsP70122 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SbdsP70122 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SbdsP70122 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SbdsP70122 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.8□□□□□ -0.36
SbdsP70122 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SbdsP70122 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.8□□□□□ -0.36
SbdsP70122 Gm9083-201ENSMUST00000120423 819 ntBASIC12.8□□□□□ -0.36
SbdsP70122 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SbdsP70122 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SbdsP70122 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.8□□□□□ -0.36
SbdsP70122 Gm44405-201ENSMUST00000198952 126 ntBASIC12.8□□□□□ -0.36
SbdsP70122 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SbdsP70122 Gm44958-201ENSMUST00000203734 736 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms