Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Lmo4P61969 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Gm7002-201ENSMUST00000221386 2165 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC9.9□□□□□ -0.82
Lmo4P61969 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Lmo4P61969 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Lmo4P61969 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 Gm10051-201ENSMUST00000145209 414 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.9□□□□□ -0.82
Lmo4P61969 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Gm3508-201ENSMUST00000186012 792 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 Gm28686-201ENSMUST00000187404 609 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 Gm4034-201ENSMUST00000187674 480 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.9□□□□□ -0.82
Lmo4P61969 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 Gm6905-201ENSMUST00000205729 511 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.9□□□□□ -0.82
Lmo4P61969 Gm45770-201ENSMUST00000212105 616 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 Gm9797-202ENSMUST00000218003 294 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.9□□□□□ -0.82
Lmo4P61969 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Gm10288-201ENSMUST00000084614 537 ntBASIC9.9□□□□□ -0.82
Lmo4P61969 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Lmo4P61969 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lmo4P61969 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC9.9□□□□□ -0.82
Lmo4P61969 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.9□□□□□ -0.83
Lmo4P61969 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.83
Lmo4P61969 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Lmo4P61969 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lmo4P61969 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lmo4P61969 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Lmo4P61969 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.89□□□□□ -0.83
Lmo4P61969 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Ntrk2-209ENSMUST00000225950 2640 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Lmo4P61969 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Lmo4P61969 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Lmo4P61969 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC9.89□□□□□ -0.83
Lmo4P61969 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.89□□□□□ -0.83
Lmo4P61969 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.89□□□□□ -0.83
Lmo4P61969 Gm8199-201ENSMUST00000121323 823 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Lmo4P61969 Gm7467-201ENSMUST00000185173 652 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Gm37835-201ENSMUST00000193305 361 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Gm18893-201ENSMUST00000198416 943 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.89□□□□□ -0.83
Lmo4P61969 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.89□□□□□ -0.83
Lmo4P61969 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.89□□□□□ -0.83
Lmo4P61969 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Lmo4P61969 Ginm1-202ENSMUST00000065124 300 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC9.89□□□□□ -0.83
Lmo4P61969 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.89□□□□□ -0.83
Lmo4P61969 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC9.89□□□□□ -0.83
Lmo4P61969 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lmo4P61969 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms