Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gm27390-201ENSMUST00000184516 176 ntBASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gm44882-201ENSMUST00000205702 802 ntBASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gm18062-201ENSMUST00000208020 547 ntBASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gm18055-201ENSMUST00000208254 547 ntBASIC12.55□□□□□ -0.4
Tubgcp3P58854 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gm25857-201ENSMUST00000082788 129 ntBASIC12.55□□□□□ -0.4
Tubgcp3P58854 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubgcp3P58854 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.54□□□□□ -0.4
Tubgcp3P58854 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gm12058-201ENSMUST00000118614 437 ntBASIC12.54□□□□□ -0.4
Tubgcp3P58854 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gm13875-201ENSMUST00000120162 282 ntBASIC12.54□□□□□ -0.4
Tubgcp3P58854 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gm27023-201ENSMUST00000182372 285 ntBASIC12.54□□□□□ -0.4
Tubgcp3P58854 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gm37424-201ENSMUST00000191727 561 ntBASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gm43133-201ENSMUST00000197472 463 ntBASIC12.54□□□□□ -0.4
Tubgcp3P58854 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.54□□□□□ -0.4
Tubgcp3P58854 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Tubgcp3P58854 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubgcp3P58854 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.53□□□□□ -0.4
Tubgcp3P58854 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Tubgcp3P58854 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Gm37201-201ENSMUST00000191845 523 ntBASIC12.53□□□□□ -0.4
Tubgcp3P58854 Gm38002-201ENSMUST00000193255 180 ntBASIC12.53□□□□□ -0.4
Tubgcp3P58854 Gm38158-201ENSMUST00000194617 339 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms