Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
NcanP55066 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NcanP55066 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.88□□□□□ -0.35
NcanP55066 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.88□□□□□ -0.35
NcanP55066 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NcanP55066 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.88□□□□□ -0.35
NcanP55066 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NcanP55066 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NcanP55066 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NcanP55066 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NcanP55066 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.87□□□□□ -0.35
NcanP55066 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.87□□□□□ -0.35
NcanP55066 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.87□□□□□ -0.35
NcanP55066 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
NcanP55066 Gm14807-201ENSMUST00000116640 983 ntBASIC12.87□□□□□ -0.35
NcanP55066 Gm13117-201ENSMUST00000120894 691 ntBASIC12.87□□□□□ -0.35
NcanP55066 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.87□□□□□ -0.35
NcanP55066 Gm16305-201ENSMUST00000140747 556 ntBASIC12.87□□□□□ -0.35
NcanP55066 Gm18711-201ENSMUST00000199341 750 ntBASIC12.87□□□□□ -0.35
NcanP55066 Gm3726-201ENSMUST00000203110 785 ntBASIC12.87□□□□□ -0.35
NcanP55066 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.87□□□□□ -0.35
NcanP55066 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
NcanP55066 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
NcanP55066 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NcanP55066 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.86□□□□□ -0.35
NcanP55066 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
NcanP55066 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
NcanP55066 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.86□□□□□ -0.35
NcanP55066 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NcanP55066 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Gm14760-201ENSMUST00000121831 999 ntBASIC12.86□□□□□ -0.35
NcanP55066 Gm12906-201ENSMUST00000154610 441 ntBASIC12.86□□□□□ -0.35
NcanP55066 Gm3150-201ENSMUST00000166418 204 ntBASIC12.86□□□□□ -0.35
NcanP55066 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
NcanP55066 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.86□□□□□ -0.35
NcanP55066 Gm19587-201ENSMUST00000191395 545 ntBASIC12.86□□□□□ -0.35
NcanP55066 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.86□□□□□ -0.35
NcanP55066 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.86□□□□□ -0.35
NcanP55066 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.86□□□□□ -0.35
NcanP55066 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
NcanP55066 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NcanP55066 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.86□□□□□ -0.35
NcanP55066 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.86□□□□□ -0.35
NcanP55066 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.86□□□□□ -0.35
NcanP55066 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NcanP55066 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.86□□□□□ -0.35
NcanP55066 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NcanP55066 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NcanP55066 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
NcanP55066 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NcanP55066 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
NcanP55066 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NcanP55066 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
NcanP55066 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NcanP55066 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NcanP55066 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NcanP55066 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
NcanP55066 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NcanP55066 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NcanP55066 Gm13351-201ENSMUST00000118087 414 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms