Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nub1P54729 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nub1P54729 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nub1P54729 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Nub1P54729 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nub1P54729 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nub1P54729 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nub1P54729 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nub1P54729 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nub1P54729 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Gm9083-201ENSMUST00000120423 819 ntBASIC13.27□□□□□ -0.29
Nub1P54729 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.27□□□□□ -0.29
Nub1P54729 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.27□□□□□ -0.29
Nub1P54729 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nub1P54729 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.27□□□□□ -0.29
Nub1P54729 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.27□□□□□ -0.29
Nub1P54729 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.27□□□□□ -0.29
Nub1P54729 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nub1P54729 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nub1P54729 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nub1P54729 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nub1P54729 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nub1P54729 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nub1P54729 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.26□□□□□ -0.29
Nub1P54729 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.26□□□□□ -0.29
Nub1P54729 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.26□□□□□ -0.29
Nub1P54729 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Gm30285-201ENSMUST00000214614 422 ntBASIC13.26□□□□□ -0.29
Nub1P54729 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.26□□□□□ -0.29
Nub1P54729 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nub1P54729 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nub1P54729 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.26□□□□□ -0.29
Nub1P54729 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nub1P54729 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.26□□□□□ -0.29
Nub1P54729 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Nub1P54729 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.25□□□□□ -0.29
Nub1P54729 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.25□□□□□ -0.29
Nub1P54729 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nub1P54729 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Nub1P54729 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.25□□□□□ -0.29
Nub1P54729 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nub1P54729 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms