Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.23□□□□□ -0.45
Atxn1P54254 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.23□□□□□ -0.45
Atxn1P54254 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.23□□□□□ -0.45
Atxn1P54254 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Atxn1P54254 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.23□□□□□ -0.45
Atxn1P54254 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Atxn1P54254 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.23□□□□□ -0.45
Atxn1P54254 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Atxn1P54254 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Atxn1P54254 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atxn1P54254 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Atxn1P54254 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.22□□□□□ -0.45
Atxn1P54254 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.22□□□□□ -0.45
Atxn1P54254 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.22□□□□□ -0.45
Atxn1P54254 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Atxn1P54254 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.22□□□□□ -0.45
Atxn1P54254 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Gm11941-201ENSMUST00000119904 610 ntBASIC12.22□□□□□ -0.45
Atxn1P54254 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Atxn1P54254 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.22□□□□□ -0.45
Atxn1P54254 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.22□□□□□ -0.45
Atxn1P54254 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.22□□□□□ -0.45
Atxn1P54254 Gm37246-201ENSMUST00000192665 835 ntBASIC12.22□□□□□ -0.45
Atxn1P54254 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.22□□□□□ -0.45
Atxn1P54254 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.22□□□□□ -0.45
Atxn1P54254 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.22□□□□□ -0.45
Atxn1P54254 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.22□□□□□ -0.45
Atxn1P54254 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.22□□□□□ -0.45
Atxn1P54254 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.22□□□□□ -0.45
Atxn1P54254 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atxn1P54254 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.21□□□□□ -0.45
Atxn1P54254 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Atxn1P54254 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Atxn1P54254 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Atxn1P54254 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Atxn1P54254 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.21□□□□□ -0.45
Atxn1P54254 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.21□□□□□ -0.45
Atxn1P54254 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.21□□□□□ -0.45
Atxn1P54254 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Atxn1P54254 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Atxn1P54254 Gm23363-201ENSMUST00000175024 79 ntBASIC12.21□□□□□ -0.45
Atxn1P54254 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.21□□□□□ -0.45
Atxn1P54254 Gm19187-201ENSMUST00000206781 892 ntBASIC12.21□□□□□ -0.45
Atxn1P54254 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms