Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fdft1P53798 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Fdft1P53798 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.29□□□□□ -0.44
Fdft1P53798 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.29□□□□□ -0.44
Fdft1P53798 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Fdft1P53798 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.29□□□□□ -0.44
Fdft1P53798 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Fdft1P53798 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.29□□□□□ -0.44
Fdft1P53798 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.29□□□□□ -0.44
Fdft1P53798 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.29□□□□□ -0.44
Fdft1P53798 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
Fdft1P53798 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.29□□□□□ -0.44
Fdft1P53798 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Fdft1P53798 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Fdft1P53798 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.29□□□□□ -0.44
Fdft1P53798 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Fdft1P53798 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Fdft1P53798 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fdft1P53798 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.28□□□□□ -0.44
Fdft1P53798 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Fdft1P53798 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.28□□□□□ -0.44
Fdft1P53798 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Gm5781-201ENSMUST00000219792 443 ntBASIC12.28□□□□□ -0.44
Fdft1P53798 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.28□□□□□ -0.44
Fdft1P53798 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Fdft1P53798 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fdft1P53798 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms