Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SftpbP50405 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SftpbP50405 Rubie-203ENSMUST00000227803 2430 ntBASIC12.56□□□□□ -0.4
SftpbP50405 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.56□□□□□ -0.4
SftpbP50405 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.56□□□□□ -0.4
SftpbP50405 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SftpbP50405 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.56□□□□□ -0.4
SftpbP50405 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
SftpbP50405 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.55□□□□□ -0.4
SftpbP50405 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SftpbP50405 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.55□□□□□ -0.4
SftpbP50405 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
SftpbP50405 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.55□□□□□ -0.4
SftpbP50405 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SftpbP50405 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.55□□□□□ -0.4
SftpbP50405 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.55□□□□□ -0.4
SftpbP50405 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.55□□□□□ -0.4
SftpbP50405 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.55□□□□□ -0.4
SftpbP50405 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Gm22058-201ENSMUST00000083393 310 ntBASIC12.55□□□□□ -0.4
SftpbP50405 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SftpbP50405 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.55□□□□□ -0.4
SftpbP50405 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SftpbP50405 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.55□□□□□ -0.4
SftpbP50405 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.55□□□□□ -0.4
SftpbP50405 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SftpbP50405 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SftpbP50405 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SftpbP50405 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SftpbP50405 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SftpbP50405 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SftpbP50405 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SftpbP50405 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Gm11478-201ENSMUST00000117851 599 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Gm13315-201ENSMUST00000120376 991 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.54□□□□□ -0.4
SftpbP50405 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.54□□□□□ -0.4
SftpbP50405 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SftpbP50405 Gm44882-201ENSMUST00000205702 802 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Gm6007-201ENSMUST00000208170 823 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Gm7653-201ENSMUST00000214567 508 ntBASIC12.54□□□□□ -0.4
SftpbP50405 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.54□□□□□ -0.4
SftpbP50405 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SftpbP50405 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SftpbP50405 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SftpbP50405 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.54□□□□□ -0.4
SftpbP50405 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
SftpbP50405 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SftpbP50405 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms