Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.81□□□□□ -0.68
GdnfP48540 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
GdnfP48540 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
GdnfP48540 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
GdnfP48540 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.81□□□□□ -0.68
GdnfP48540 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.81□□□□□ -0.68
GdnfP48540 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Gm28693-202ENSMUST00000190758 331 ntBASIC10.81□□□□□ -0.68
GdnfP48540 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
GdnfP48540 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC10.81□□□□□ -0.68
GdnfP48540 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
GdnfP48540 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
GdnfP48540 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
GdnfP48540 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.81□□□□□ -0.68
GdnfP48540 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.81□□□□□ -0.68
GdnfP48540 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.81□□□□□ -0.68
GdnfP48540 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.81□□□□□ -0.68
GdnfP48540 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
GdnfP48540 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
GdnfP48540 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.8□□□□□ -0.68
GdnfP48540 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
GdnfP48540 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
GdnfP48540 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.8□□□□□ -0.68
GdnfP48540 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
GdnfP48540 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.8□□□□□ -0.68
GdnfP48540 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 Gm27847-201ENSMUST00000183711 107 ntBASIC10.8□□□□□ -0.68
GdnfP48540 Gm27375-201ENSMUST00000183799 107 ntBASIC10.8□□□□□ -0.68
GdnfP48540 Gm37922-201ENSMUST00000195596 455 ntBASIC10.8□□□□□ -0.68
GdnfP48540 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC10.8□□□□□ -0.68
GdnfP48540 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.8□□□□□ -0.68
GdnfP48540 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.8□□□□□ -0.68
GdnfP48540 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.8□□□□□ -0.68
GdnfP48540 AC106830.1-201ENSMUST00000228032 1003 ntBASIC10.8□□□□□ -0.68
GdnfP48540 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
GdnfP48540 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
GdnfP48540 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
GdnfP48540 Cog3-203ENSMUST00000227473 4197 ntBASIC10.8□□□□□ -0.68
GdnfP48540 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
GdnfP48540 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms