Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.64□□□□□ -0.55
Nkx2-6P43688 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gm44958-201ENSMUST00000203734 736 ntBASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.64□□□□□ -0.55
Nkx2-6P43688 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx2-6P43688 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.63□□□□□ -0.55
Nkx2-6P43688 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Gm23949-201ENSMUST00000104027 127 ntBASIC11.63□□□□□ -0.55
Nkx2-6P43688 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Gm8959-201ENSMUST00000213150 571 ntBASIC11.63□□□□□ -0.55
Nkx2-6P43688 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-6P43688 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.63□□□□□ -0.55
Nkx2-6P43688 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.62□□□□□ -0.55
Nkx2-6P43688 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.62□□□□□ -0.55
Nkx2-6P43688 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Gm24934-201ENSMUST00000103764 111 ntBASIC11.62□□□□□ -0.55
Nkx2-6P43688 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Gm12380-201ENSMUST00000119012 544 ntBASIC11.62□□□□□ -0.55
Nkx2-6P43688 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.62□□□□□ -0.55
Nkx2-6P43688 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Nkx2-6P43688 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.62□□□□□ -0.55
Nkx2-6P43688 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-6P43688 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms