Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.15□□□□□ -0.78
Hist1h1aP43275 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.15□□□□□ -0.78
Hist1h1aP43275 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.15□□□□□ -0.78
Hist1h1aP43275 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.15□□□□□ -0.78
Hist1h1aP43275 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Gm9908-201ENSMUST00000211534 448 ntBASIC10.15□□□□□ -0.78
Hist1h1aP43275 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hist1h1aP43275 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.15□□□□□ -0.79
Hist1h1aP43275 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.15□□□□□ -0.79
Hist1h1aP43275 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.15□□□□□ -0.79
Hist1h1aP43275 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.15□□□□□ -0.79
Hist1h1aP43275 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hist1h1aP43275 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Hist1h1aP43275 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hist1h1aP43275 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hist1h1aP43275 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hist1h1aP43275 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hist1h1aP43275 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hist1h1aP43275 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Hist1h1aP43275 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Hist1h1aP43275 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hist1h1aP43275 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Gm14928-201ENSMUST00000120198 477 ntBASIC10.14□□□□□ -0.79
Hist1h1aP43275 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Gm37497-201ENSMUST00000195830 798 ntBASIC10.14□□□□□ -0.79
Hist1h1aP43275 Gm17794-201ENSMUST00000220252 955 ntBASIC10.14□□□□□ -0.79
Hist1h1aP43275 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.14□□□□□ -0.79
Hist1h1aP43275 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.14□□□□□ -0.79
Hist1h1aP43275 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.14□□□□□ -0.79
Hist1h1aP43275 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.14□□□□□ -0.79
Hist1h1aP43275 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Gm10146-201ENSMUST00000072739 309 ntBASIC10.14□□□□□ -0.79
Hist1h1aP43275 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.14□□□□□ -0.79
Hist1h1aP43275 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hist1h1aP43275 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hist1h1aP43275 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hist1h1aP43275 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hist1h1aP43275 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hist1h1aP43275 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Hist1h1aP43275 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hist1h1aP43275 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Hist1h1aP43275 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms