Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.67□□□□□ -0.38
HttP42859 Gm13281-201ENSMUST00000120871 567 ntBASIC12.67□□□□□ -0.38
HttP42859 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Gm9162-201ENSMUST00000182081 991 ntBASIC12.67□□□□□ -0.38
HttP42859 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.67□□□□□ -0.38
HttP42859 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.67□□□□□ -0.38
HttP42859 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HttP42859 Gm14113-201ENSMUST00000121399 976 ntBASIC12.66□□□□□ -0.38
HttP42859 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.66□□□□□ -0.38
HttP42859 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HttP42859 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.66□□□□□ -0.38
HttP42859 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Gm13192-201ENSMUST00000101199 208 ntBASIC12.66□□□□□ -0.38
HttP42859 Gm10443-201ENSMUST00000119024 210 ntBASIC12.66□□□□□ -0.38
HttP42859 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Gm9192-201ENSMUST00000183221 985 ntBASIC12.66□□□□□ -0.38
HttP42859 Gm20568-201ENSMUST00000197129 208 ntBASIC12.66□□□□□ -0.38
HttP42859 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.66□□□□□ -0.38
HttP42859 Gm9487-201ENSMUST00000216600 472 ntBASIC12.66□□□□□ -0.38
HttP42859 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.66□□□□□ -0.38
HttP42859 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.66□□□□□ -0.38
HttP42859 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.66□□□□□ -0.38
HttP42859 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Gm15626-201ENSMUST00000117478 868 ntBASIC12.66□□□□□ -0.38
HttP42859 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.66□□□□□ -0.38
HttP42859 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.66□□□□□ -0.38
HttP42859 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HttP42859 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.65□□□□□ -0.38
HttP42859 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.65□□□□□ -0.38
HttP42859 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HttP42859 Gm6755-201ENSMUST00000100598 864 ntBASIC12.65□□□□□ -0.38
HttP42859 Gm6740-201ENSMUST00000100617 864 ntBASIC12.65□□□□□ -0.38
HttP42859 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.65□□□□□ -0.38
HttP42859 Gm5040-201ENSMUST00000218609 800 ntBASIC12.65□□□□□ -0.38
HttP42859 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HttP42859 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HttP42859 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HttP42859 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.65□□□□□ -0.38
HttP42859 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC12.65□□□□□ -0.38
HttP42859 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
HttP42859 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Gm15815-201ENSMUST00000120569 255 ntBASIC12.65□□□□□ -0.38
HttP42859 Gm38233-201ENSMUST00000194259 807 ntBASIC12.65□□□□□ -0.38
HttP42859 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.65□□□□□ -0.38
HttP42859 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HttP42859 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HttP42859 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.65□□□□□ -0.38
HttP42859 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HttP42859 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HttP42859 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
HttP42859 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
HttP42859 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
HttP42859 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.65□□□□□ -0.39
HttP42859 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.65□□□□□ -0.39
HttP42859 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms