Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.25□□□□□ -0.61
Nkx2-2P42586 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.25□□□□□ -0.61
Nkx2-2P42586 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Matn2-203ENSMUST00000226766 3252 ntBASIC11.25□□□□□ -0.61
Nkx2-2P42586 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-2P42586 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.25□□□□□ -0.61
Nkx2-2P42586 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.24□□□□□ -0.61
Nkx2-2P42586 Gm14247-201ENSMUST00000120950 237 ntBASIC11.24□□□□□ -0.61
Nkx2-2P42586 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Mir1938-201ENSMUST00000158746 100 ntBASIC11.24□□□□□ -0.61
Nkx2-2P42586 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.24□□□□□ -0.61
Nkx2-2P42586 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.24□□□□□ -0.61
Nkx2-2P42586 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.24□□□□□ -0.61
Nkx2-2P42586 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.24□□□□□ -0.61
Nkx2-2P42586 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.24□□□□□ -0.61
Nkx2-2P42586 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-2P42586 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.24□□□□□ -0.61
Nkx2-2P42586 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms