Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
RxrbP28704 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Gm12036-201ENSMUST00000120008 530 ntBASIC12.33□□□□□ -0.44
RxrbP28704 Mir1894-201ENSMUST00000122802 81 ntBASIC12.33□□□□□ -0.44
RxrbP28704 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.33□□□□□ -0.44
RxrbP28704 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Gm23119-201ENSMUST00000158610 140 ntBASIC12.33□□□□□ -0.44
RxrbP28704 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
RxrbP28704 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.33□□□□□ -0.44
RxrbP28704 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Proscos-202ENSMUST00000178990 666 ntBASIC12.33□□□□□ -0.44
RxrbP28704 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.33□□□□□ -0.44
RxrbP28704 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Btrc-209ENSMUST00000224478 2194 ntBASIC12.33□□□□□ -0.44
RxrbP28704 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.33□□□□□ -0.44
RxrbP28704 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RxrbP28704 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RxrbP28704 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.33□□□□□ -0.44
RxrbP28704 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.32□□□□□ -0.44
RxrbP28704 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.32□□□□□ -0.44
RxrbP28704 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.32□□□□□ -0.44
RxrbP28704 Gm8805-201ENSMUST00000117848 313 ntBASIC12.32□□□□□ -0.44
RxrbP28704 Gm13123-201ENSMUST00000122173 492 ntBASIC12.32□□□□□ -0.44
RxrbP28704 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.32□□□□□ -0.44
RxrbP28704 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.32□□□□□ -0.44
RxrbP28704 Gm27331-201ENSMUST00000183705 60 ntBASIC12.32□□□□□ -0.44
RxrbP28704 Gm37497-201ENSMUST00000195830 798 ntBASIC12.32□□□□□ -0.44
RxrbP28704 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.32□□□□□ -0.44
RxrbP28704 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.32□□□□□ -0.44
RxrbP28704 Gm8598-201ENSMUST00000221184 836 ntBASIC12.32□□□□□ -0.44
RxrbP28704 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.32□□□□□ -0.44
RxrbP28704 Gm6180-201ENSMUST00000065243 498 ntBASIC12.32□□□□□ -0.44
RxrbP28704 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RxrbP28704 Gm10012-201ENSMUST00000078252 192 ntBASIC12.32□□□□□ -0.44
RxrbP28704 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.32□□□□□ -0.44
RxrbP28704 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
RxrbP28704 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RxrbP28704 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.31□□□□□ -0.44
RxrbP28704 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.31□□□□□ -0.44
RxrbP28704 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.31□□□□□ -0.44
RxrbP28704 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.31□□□□□ -0.44
RxrbP28704 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.31□□□□□ -0.44
RxrbP28704 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RxrbP28704 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.31□□□□□ -0.44
RxrbP28704 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.31□□□□□ -0.44
RxrbP28704 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RxrbP28704 Rmrp-201ENSMUST00000157463 271 ntBASIC12.31□□□□□ -0.44
RxrbP28704 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RxrbP28704 Gm9002-201ENSMUST00000178437 499 ntBASIC12.31□□□□□ -0.44
RxrbP28704 Gm9022-201ENSMUST00000182482 992 ntBASIC12.31□□□□□ -0.44
RxrbP28704 Gm27243-201ENSMUST00000183964 521 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms