Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col2a1P28481 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col2a1P28481 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.77□□□□□ -0.2
Col2a1P28481 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Col2a1P28481 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Mir7076-201ENSMUST00000183519 74 ntBASIC13.77□□□□□ -0.21
Col2a1P28481 Gm9132-201ENSMUST00000210182 832 ntBASIC13.77□□□□□ -0.21
Col2a1P28481 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.77□□□□□ -0.21
Col2a1P28481 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col2a1P28481 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col2a1P28481 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col2a1P28481 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.76□□□□□ -0.21
Col2a1P28481 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.76□□□□□ -0.21
Col2a1P28481 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.76□□□□□ -0.21
Col2a1P28481 Gm8459-201ENSMUST00000162504 760 ntBASIC13.76□□□□□ -0.21
Col2a1P28481 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.76□□□□□ -0.21
Col2a1P28481 Mir8093-201ENSMUST00000185043 137 ntBASIC13.76□□□□□ -0.21
Col2a1P28481 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.76□□□□□ -0.21
Col2a1P28481 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.76□□□□□ -0.21
Col2a1P28481 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.76□□□□□ -0.21
Col2a1P28481 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col2a1P28481 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col2a1P28481 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col2a1P28481 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col2a1P28481 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.75□□□□□ -0.21
Col2a1P28481 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.75□□□□□ -0.21
Col2a1P28481 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.75□□□□□ -0.21
Col2a1P28481 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.75□□□□□ -0.21
Col2a1P28481 Gm18367-201ENSMUST00000176139 600 ntBASIC13.75□□□□□ -0.21
Col2a1P28481 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.75□□□□□ -0.21
Col2a1P28481 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col2a1P28481 Mir7032-201ENSMUST00000185154 79 ntBASIC13.75□□□□□ -0.21
Col2a1P28481 Gm45219-201ENSMUST00000205602 465 ntBASIC13.75□□□□□ -0.21
Col2a1P28481 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col2a1P28481 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.75□□□□□ -0.21
Col2a1P28481 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.75□□□□□ -0.21
Col2a1P28481 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col2a1P28481 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col2a1P28481 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Gm12419-201ENSMUST00000116649 636 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Gm11949-201ENSMUST00000117640 372 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Gm11956-201ENSMUST00000119525 512 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Gm14585-201ENSMUST00000120713 634 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Gm11836-201ENSMUST00000121022 441 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.74□□□□□ -0.21
Col2a1P28481 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col2a1P28481 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Col2a1P28481 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.74□□□□□ -0.21
Col2a1P28481 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Gm43520-201ENSMUST00000197996 164 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms