Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pde6aP27664 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.22□□□□□ -0.13
Pde6aP27664 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.22□□□□□ -0.13
Pde6aP27664 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.22□□□□□ -0.13
Pde6aP27664 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pde6aP27664 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.22□□□□□ -0.13
Pde6aP27664 Gm7722-201ENSMUST00000120646 741 ntBASIC14.22□□□□□ -0.13
Pde6aP27664 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.22□□□□□ -0.13
Pde6aP27664 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.22□□□□□ -0.13
Pde6aP27664 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pde6aP27664 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pde6aP27664 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.22□□□□□ -0.13
Pde6aP27664 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pde6aP27664 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6aP27664 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pde6aP27664 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pde6aP27664 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.21□□□□□ -0.13
Pde6aP27664 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pde6aP27664 Gm12164-201ENSMUST00000121695 551 ntBASIC14.21□□□□□ -0.13
Pde6aP27664 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.21□□□□□ -0.13
Pde6aP27664 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.21□□□□□ -0.13
Pde6aP27664 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.21□□□□□ -0.13
Pde6aP27664 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pde6aP27664 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6aP27664 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.21□□□□□ -0.14
Pde6aP27664 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6aP27664 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Pde6aP27664 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.21□□□□□ -0.14
Pde6aP27664 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6aP27664 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6aP27664 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6aP27664 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pde6aP27664 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6aP27664 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6aP27664 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6aP27664 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.2□□□□□ -0.14
Pde6aP27664 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.2□□□□□ -0.14
Pde6aP27664 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.2□□□□□ -0.14
Pde6aP27664 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.2□□□□□ -0.14
Pde6aP27664 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.2□□□□□ -0.14
Pde6aP27664 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pde6aP27664 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Gm13665-201ENSMUST00000120830 528 ntBASIC14.2□□□□□ -0.14
Pde6aP27664 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.2□□□□□ -0.14
Pde6aP27664 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.2□□□□□ -0.14
Pde6aP27664 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.2□□□□□ -0.14
Pde6aP27664 Gm38241-201ENSMUST00000192641 898 ntBASIC14.2□□□□□ -0.14
Pde6aP27664 Gm32999-201ENSMUST00000192693 562 ntBASIC14.2□□□□□ -0.14
Pde6aP27664 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pde6aP27664 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.2□□□□□ -0.14
Pde6aP27664 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms