Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.82□□□□□ -0.52
BdnfP21237 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
BdnfP21237 Gm8099-201ENSMUST00000200510 742 ntBASIC11.82□□□□□ -0.52
BdnfP21237 Gm42599-201ENSMUST00000201308 469 ntBASIC11.82□□□□□ -0.52
BdnfP21237 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.82□□□□□ -0.52
BdnfP21237 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.82□□□□□ -0.52
BdnfP21237 Gm7653-201ENSMUST00000214567 508 ntBASIC11.82□□□□□ -0.52
BdnfP21237 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
BdnfP21237 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
BdnfP21237 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
BdnfP21237 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.82□□□□□ -0.52
BdnfP21237 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Cog3-203ENSMUST00000227473 4197 ntBASIC11.82□□□□□ -0.52
BdnfP21237 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BdnfP21237 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
BdnfP21237 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.81□□□□□ -0.52
BdnfP21237 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
BdnfP21237 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
BdnfP21237 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
BdnfP21237 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
BdnfP21237 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.81□□□□□ -0.52
BdnfP21237 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.81□□□□□ -0.52
BdnfP21237 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.81□□□□□ -0.52
BdnfP21237 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.81□□□□□ -0.52
BdnfP21237 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Gm4271-201ENSMUST00000174444 973 ntBASIC11.81□□□□□ -0.52
BdnfP21237 Gm35960-201ENSMUST00000202712 767 ntBASIC11.81□□□□□ -0.52
BdnfP21237 Gm7561-201ENSMUST00000211203 886 ntBASIC11.81□□□□□ -0.52
BdnfP21237 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.81□□□□□ -0.52
BdnfP21237 Gm32025-201ENSMUST00000217960 307 ntBASIC11.81□□□□□ -0.52
BdnfP21237 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.81□□□□□ -0.52
BdnfP21237 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
BdnfP21237 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.81□□□□□ -0.52
BdnfP21237 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.81□□□□□ -0.52
BdnfP21237 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
BdnfP21237 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
BdnfP21237 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BdnfP21237 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
BdnfP21237 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
BdnfP21237 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.8□□□□□ -0.52
BdnfP21237 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.8□□□□□ -0.52
BdnfP21237 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.8□□□□□ -0.52
BdnfP21237 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Gm7029-201ENSMUST00000173226 450 ntBASIC11.8□□□□□ -0.52
BdnfP21237 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
BdnfP21237 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.8□□□□□ -0.52
BdnfP21237 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.8□□□□□ -0.52
BdnfP21237 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.8□□□□□ -0.52
BdnfP21237 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.8□□□□□ -0.52
BdnfP21237 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms