Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RaraP11416 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RaraP11416 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RaraP11416 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RaraP11416 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RaraP11416 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RaraP11416 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RaraP11416 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RaraP11416 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RaraP11416 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
RaraP11416 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RaraP11416 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RaraP11416 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RaraP11416 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RaraP11416 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RaraP11416 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RaraP11416 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
RaraP11416 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.27□□□□□ -0.29
RaraP11416 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.27□□□□□ -0.29
RaraP11416 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Gm17150-201ENSMUST00000165577 381 ntBASIC13.27□□□□□ -0.29
RaraP11416 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.27□□□□□ -0.29
RaraP11416 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.27□□□□□ -0.29
RaraP11416 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RaraP11416 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RaraP11416 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RaraP11416 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.27□□□□□ -0.29
RaraP11416 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
RaraP11416 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RaraP11416 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RaraP11416 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RaraP11416 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RaraP11416 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.27□□□□□ -0.29
RaraP11416 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.26□□□□□ -0.29
RaraP11416 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.26□□□□□ -0.29
RaraP11416 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.26□□□□□ -0.29
RaraP11416 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RaraP11416 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.26□□□□□ -0.29
RaraP11416 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.26□□□□□ -0.29
RaraP11416 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.26□□□□□ -0.29
RaraP11416 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.26□□□□□ -0.29
RaraP11416 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RaraP11416 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.26□□□□□ -0.29
RaraP11416 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.26□□□□□ -0.29
RaraP11416 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.26□□□□□ -0.29
RaraP11416 Gm6266-201ENSMUST00000203844 806 ntBASIC13.26□□□□□ -0.29
RaraP11416 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.26□□□□□ -0.29
RaraP11416 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.26□□□□□ -0.29
RaraP11416 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.26□□□□□ -0.29
RaraP11416 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.26□□□□□ -0.29
RaraP11416 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RaraP11416 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RaraP11416 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RaraP11416 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.26□□□□□ -0.29
RaraP11416 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RaraP11416 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RaraP11416 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.25□□□□□ -0.29
RaraP11416 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.25□□□□□ -0.29
RaraP11416 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms