Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.22□□□□□ -0.13
Col1a1P11087 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col1a1P11087 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col1a1P11087 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col1a1P11087 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col1a1P11087 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col1a1P11087 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col1a1P11087 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col1a1P11087 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col1a1P11087 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col1a1P11087 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col1a1P11087 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.22□□□□□ -0.13
Col1a1P11087 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col1a1P11087 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col1a1P11087 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.21□□□□□ -0.13
Col1a1P11087 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Col1a1P11087 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Gm23272-201ENSMUST00000104053 129 ntBASIC14.21□□□□□ -0.13
Col1a1P11087 Gm12990-201ENSMUST00000120372 468 ntBASIC14.21□□□□□ -0.13
Col1a1P11087 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Col1a1P11087 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.21□□□□□ -0.13
Col1a1P11087 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.21□□□□□ -0.13
Col1a1P11087 Gm4034-201ENSMUST00000187674 480 ntBASIC14.21□□□□□ -0.13
Col1a1P11087 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.21□□□□□ -0.13
Col1a1P11087 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col1a1P11087 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.21□□□□□ -0.13
Col1a1P11087 Gm8342-201ENSMUST00000209839 757 ntBASIC14.21□□□□□ -0.13
Col1a1P11087 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC14.21□□□□□ -0.13
Col1a1P11087 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.21□□□□□ -0.13
Col1a1P11087 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col1a1P11087 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Col1a1P11087 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col1a1P11087 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col1a1P11087 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col1a1P11087 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col1a1P11087 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col1a1P11087 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.2□□□□□ -0.14
Col1a1P11087 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col1a1P11087 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Gm5706-201ENSMUST00000181525 993 ntBASIC14.2□□□□□ -0.14
Col1a1P11087 Mir6407-201ENSMUST00000184510 101 ntBASIC14.2□□□□□ -0.14
Col1a1P11087 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.2□□□□□ -0.14
Col1a1P11087 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.2□□□□□ -0.14
Col1a1P11087 Gm45113-201ENSMUST00000207518 165 ntBASIC14.2□□□□□ -0.14
Col1a1P11087 Gm18041-201ENSMUST00000218210 618 ntBASIC14.2□□□□□ -0.14
Col1a1P11087 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col1a1P11087 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Col1a1P11087 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.2□□□□□ -0.14
Col1a1P11087 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col1a1P11087 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.2□□□□□ -0.14
Col1a1P11087 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.2□□□□□ -0.14
Col1a1P11087 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col1a1P11087 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.2□□□□□ -0.14
Col1a1P11087 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col1a1P11087 Gm11980-201ENSMUST00000121445 986 ntBASIC14.19□□□□□ -0.14
Col1a1P11087 Gm7150-201ENSMUST00000122032 981 ntBASIC14.19□□□□□ -0.14
Col1a1P11087 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms