Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 AC123619.2-202ENSMUST00000225097 1568 ntBASIC18.22■□□□□ 0.51
NclP09405 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NclP09405 Gm22133-201ENSMUST00000102082 109 ntBASIC18.22■□□□□ 0.51
NclP09405 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC18.22■□□□□ 0.51
NclP09405 Gm22902-201ENSMUST00000158488 302 ntBASIC18.22■□□□□ 0.51
NclP09405 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC18.22■□□□□ 0.51
NclP09405 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Gm43378-201ENSMUST00000199336 582 ntBASIC18.22■□□□□ 0.51
NclP09405 Gm43962-201ENSMUST00000203898 190 ntBASIC18.22■□□□□ 0.51
NclP09405 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC18.22■□□□□ 0.51
NclP09405 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC18.22■□□□□ 0.51
NclP09405 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC18.22■□□□□ 0.51
NclP09405 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NclP09405 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC18.22■□□□□ 0.51
NclP09405 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC18.21■□□□□ 0.51
NclP09405 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NclP09405 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NclP09405 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NclP09405 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NclP09405 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC18.21■□□□□ 0.51
NclP09405 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Gm37986-201ENSMUST00000193285 383 ntBASIC18.21■□□□□ 0.51
NclP09405 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC18.21■□□□□ 0.51
NclP09405 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NclP09405 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NclP09405 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NclP09405 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC18.21■□□□□ 0.51
NclP09405 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NclP09405 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 AC126262.1-201ENSMUST00000221802 1904 ntBASIC18.21■□□□□ 0.51
NclP09405 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NclP09405 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NclP09405 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC18.21■□□□□ 0.5
NclP09405 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Gm38385-201ENSMUST00000194454 2351 ntBASIC18.2■□□□□ 0.5
NclP09405 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NclP09405 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC18.2■□□□□ 0.5
NclP09405 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
NclP09405 Gm21027-201ENSMUST00000219300 1236 ntBASIC18.2■□□□□ 0.5
NclP09405 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Gm38355-201ENSMUST00000192514 1570 ntBASIC18.2■□□□□ 0.5
NclP09405 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
NclP09405 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NclP09405 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NclP09405 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NclP09405 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NclP09405 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
NclP09405 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NclP09405 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NclP09405 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC18.19■□□□□ 0.5
NclP09405 Gm18734-201ENSMUST00000172937 808 ntBASIC18.19■□□□□ 0.5
NclP09405 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC18.19■□□□□ 0.5
NclP09405 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Gm34767-201ENSMUST00000191813 1062 ntBASIC18.19■□□□□ 0.5
NclP09405 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC18.19■□□□□ 0.5
NclP09405 Gm44136-201ENSMUST00000203819 1106 ntBASIC18.19■□□□□ 0.5
NclP09405 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NclP09405 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms