Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hoxc8P09025 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc8P09025 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hoxc8P09025 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Hoxc8P09025 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hoxc8P09025 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Hoxc8P09025 Gm8155-201ENSMUST00000216363 1612 ntBASIC13□□□□□ -0.33
Hoxc8P09025 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Gm11628-201ENSMUST00000117568 171 ntBASIC13□□□□□ -0.33
Hoxc8P09025 Gm16166-201ENSMUST00000118291 787 ntBASIC13□□□□□ -0.33
Hoxc8P09025 Gm11451-201ENSMUST00000118946 630 ntBASIC13□□□□□ -0.33
Hoxc8P09025 Gm11836-201ENSMUST00000121022 441 ntBASIC13□□□□□ -0.33
Hoxc8P09025 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Gm18367-201ENSMUST00000176139 600 ntBASIC13□□□□□ -0.33
Hoxc8P09025 Gm4654-201ENSMUST00000183305 982 ntBASIC13□□□□□ -0.33
Hoxc8P09025 Gm27910-201ENSMUST00000185004 107 ntBASIC13□□□□□ -0.33
Hoxc8P09025 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13□□□□□ -0.33
Hoxc8P09025 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13□□□□□ -0.33
Hoxc8P09025 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13□□□□□ -0.33
Hoxc8P09025 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13□□□□□ -0.33
Hoxc8P09025 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hoxc8P09025 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13□□□□□ -0.33
Hoxc8P09025 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13□□□□□ -0.33
Hoxc8P09025 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hoxc8P09025 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13□□□□□ -0.33
Hoxc8P09025 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hoxc8P09025 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.99□□□□□ -0.33
Hoxc8P09025 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.99□□□□□ -0.33
Hoxc8P09025 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxc8P09025 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Gm43058-201ENSMUST00000197645 625 ntBASIC12.99□□□□□ -0.33
Hoxc8P09025 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Gm44506-201ENSMUST00000206278 965 ntBASIC12.99□□□□□ -0.33
Hoxc8P09025 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Hoxc8P09025 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxc8P09025 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms