Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
ApoeP08226 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.62□□□□□ -0.55
ApoeP08226 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.62□□□□□ -0.55
ApoeP08226 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.62□□□□□ -0.55
ApoeP08226 Gm11964-201ENSMUST00000120982 444 ntBASIC11.62□□□□□ -0.55
ApoeP08226 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ApoeP08226 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ApoeP08226 Gm32025-201ENSMUST00000217960 307 ntBASIC11.62□□□□□ -0.55
ApoeP08226 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.62□□□□□ -0.55
ApoeP08226 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ApoeP08226 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
ApoeP08226 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
ApoeP08226 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ApoeP08226 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.62□□□□□ -0.55
ApoeP08226 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ApoeP08226 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ApoeP08226 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
ApoeP08226 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ApoeP08226 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.61□□□□□ -0.55
ApoeP08226 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
ApoeP08226 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.61□□□□□ -0.55
ApoeP08226 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.61□□□□□ -0.55
ApoeP08226 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.61□□□□□ -0.55
ApoeP08226 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.61□□□□□ -0.55
ApoeP08226 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.61□□□□□ -0.55
ApoeP08226 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.61□□□□□ -0.55
ApoeP08226 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.61□□□□□ -0.55
ApoeP08226 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.61□□□□□ -0.55
ApoeP08226 Gm37497-201ENSMUST00000195830 798 ntBASIC11.61□□□□□ -0.55
ApoeP08226 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.61□□□□□ -0.55
ApoeP08226 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.61□□□□□ -0.55
ApoeP08226 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ApoeP08226 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ApoeP08226 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
ApoeP08226 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.61□□□□□ -0.55
ApoeP08226 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.61□□□□□ -0.55
ApoeP08226 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
ApoeP08226 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ApoeP08226 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ApoeP08226 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms