Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hoxa4P06798 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa4P06798 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.09□□□□□ -0.47
Hoxa4P06798 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hoxa4P06798 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.09□□□□□ -0.47
Hoxa4P06798 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm15808-201ENSMUST00000119046 604 ntBASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm5706-201ENSMUST00000181525 993 ntBASIC12.09□□□□□ -0.47
Hoxa4P06798 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm8913-201ENSMUST00000209491 641 ntBASIC12.09□□□□□ -0.47
Hoxa4P06798 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.09□□□□□ -0.47
Hoxa4P06798 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.09□□□□□ -0.47
Hoxa4P06798 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hoxa4P06798 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Hoxa4P06798 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa4P06798 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxa4P06798 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxa4P06798 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxa4P06798 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxa4P06798 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.08□□□□□ -0.47
Hoxa4P06798 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.08□□□□□ -0.47
Hoxa4P06798 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hoxa4P06798 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Hoxa4P06798 Gm15236-201ENSMUST00000117309 379 ntBASIC12.08□□□□□ -0.48
Hoxa4P06798 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.08□□□□□ -0.48
Hoxa4P06798 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Gm5616-201ENSMUST00000165252 384 ntBASIC12.08□□□□□ -0.48
Hoxa4P06798 Gm8741-201ENSMUST00000174736 384 ntBASIC12.08□□□□□ -0.48
Hoxa4P06798 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.08□□□□□ -0.48
Hoxa4P06798 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.08□□□□□ -0.48
Hoxa4P06798 AY036118-201ENSMUST00000200021 923 ntBASIC12.08□□□□□ -0.48
Hoxa4P06798 Gm45186-201ENSMUST00000206874 478 ntBASIC12.08□□□□□ -0.48
Hoxa4P06798 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.08□□□□□ -0.48
Hoxa4P06798 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.08□□□□□ -0.48
Hoxa4P06798 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Gm5455-201ENSMUST00000058710 715 ntBASIC12.08□□□□□ -0.48
Hoxa4P06798 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hoxa4P06798 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.08□□□□□ -0.48
Hoxa4P06798 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.08□□□□□ -0.48
Hoxa4P06798 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hoxa4P06798 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms