Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Snora78-201ENSMUST00000158630 128 ntBASIC11.76□□□□□ -0.53
P04213 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.76□□□□□ -0.53
P04213 Gm38002-201ENSMUST00000193255 180 ntBASIC11.76□□□□□ -0.53
P04213 Gm35960-201ENSMUST00000202712 767 ntBASIC11.76□□□□□ -0.53
P04213 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.76□□□□□ -0.53
P04213 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.76□□□□□ -0.53
P04213 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Gm9823-201ENSMUST00000051212 327 ntBASIC11.76□□□□□ -0.53
P04213 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
P04213 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.76□□□□□ -0.53
P04213 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.76□□□□□ -0.53
P04213 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P04213 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.75□□□□□ -0.53
P04213 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.75□□□□□ -0.53
P04213 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
P04213 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.75□□□□□ -0.53
P04213 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
P04213 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Gm24845-201ENSMUST00000158034 109 ntBASIC11.75□□□□□ -0.53
P04213 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.75□□□□□ -0.53
P04213 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Gm27023-201ENSMUST00000182372 285 ntBASIC11.75□□□□□ -0.53
P04213 Gm37424-201ENSMUST00000191727 561 ntBASIC11.75□□□□□ -0.53
P04213 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.75□□□□□ -0.53
P04213 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.75□□□□□ -0.53
P04213 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.75□□□□□ -0.53
P04213 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P04213 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P04213 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
P04213 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.75□□□□□ -0.53
P04213 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
P04213 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P04213 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
P04213 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
P04213 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P04213 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.75□□□□□ -0.53
P04213 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P04213 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04213 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04213 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.74□□□□□ -0.53
P04213 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04213 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P04213 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04213 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04213 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P04213 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04213 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04213 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04213 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
P04213 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04213 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.74□□□□□ -0.53
P04213 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.74□□□□□ -0.53
P04213 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
P04213 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
P04213 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.74□□□□□ -0.53
P04213 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.74□□□□□ -0.53
P04213 Gm45880-201ENSMUST00000213041 853 ntBASIC11.74□□□□□ -0.53
P04213 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P04213 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.74□□□□□ -0.53
P04213 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms